Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Atxn1P54254 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.92□□□□□ -0.02
Atxn1P54254 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Atxn1P54254 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.92□□□□□ -0.02
Atxn1P54254 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Atxn1P54254 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.92□□□□□ -0.02
Atxn1P54254 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Atxn1P54254 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.91□□□□□ -0.02
Atxn1P54254 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Atxn1P54254 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Syt7-205ENSMUST00000224135 1557 ntBASIC14.9□□□□□ -0.02
Atxn1P54254 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Atxn1P54254 Gm6415-201ENSMUST00000118488 348 ntBASIC14.9□□□□□ -0.02
Atxn1P54254 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.9□□□□□ -0.02
Atxn1P54254 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.9□□□□□ -0.02
Atxn1P54254 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.9□□□□□ -0.02
Atxn1P54254 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Atxn1P54254 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Atxn1P54254 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Atxn1P54254 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.89□□□□□ -0.03
Atxn1P54254 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Atxn1P54254 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Atxn1P54254 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.89□□□□□ -0.03
Atxn1P54254 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Gm13453-201ENSMUST00000118708 357 ntBASIC14.89□□□□□ -0.03
Atxn1P54254 Gm16198-201ENSMUST00000118766 670 ntBASIC14.89□□□□□ -0.03
Atxn1P54254 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Gm44855-201ENSMUST00000205725 362 ntBASIC14.89□□□□□ -0.03
Atxn1P54254 Gm19164-201ENSMUST00000210667 640 ntBASIC14.89□□□□□ -0.03
Atxn1P54254 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.89□□□□□ -0.03
Atxn1P54254 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Atxn1P54254 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Atxn1P54254 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Atxn1P54254 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Atxn1P54254 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atxn1P54254 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms