Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Fdft1P53798 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fdft1P53798 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fdft1P53798 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fdft1P53798 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.02■□□□□ -0
Fdft1P53798 Gm25990-201ENSMUST00000102440 86 ntBASIC15.02■□□□□ -0
Fdft1P53798 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Fdft1P53798 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.02■□□□□ -0
Fdft1P53798 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.02■□□□□ -0
Fdft1P53798 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fdft1P53798 Gm8318-201ENSMUST00000182954 872 ntBASIC15.02■□□□□ -0
Fdft1P53798 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.02■□□□□ -0
Fdft1P53798 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.02■□□□□ -0
Fdft1P53798 Rps4l-201ENSMUST00000071745 943 ntBASIC15.02■□□□□ -0
Fdft1P53798 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.02□□□□□ -0.01
Fdft1P53798 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Fdft1P53798 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.02□□□□□ -0.01
Fdft1P53798 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.02□□□□□ -0.01
Fdft1P53798 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.02□□□□□ -0.01
Fdft1P53798 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.02□□□□□ -0.01
Fdft1P53798 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fdft1P53798 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.01□□□□□ -0.01
Fdft1P53798 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.01□□□□□ -0.01
Fdft1P53798 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Gm7153-201ENSMUST00000117092 455 ntBASIC15.01□□□□□ -0.01
Fdft1P53798 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.01□□□□□ -0.01
Fdft1P53798 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.01□□□□□ -0.01
Fdft1P53798 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Fdft1P53798 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.01□□□□□ -0.01
Fdft1P53798 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fdft1P53798 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fdft1P53798 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Gm11452-201ENSMUST00000122376 690 ntBASIC15□□□□□ -0.01
Fdft1P53798 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15□□□□□ -0.01
Fdft1P53798 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Fdft1P53798 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fdft1P53798 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Fdft1P53798 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fdft1P53798 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms