Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.38□□□□□ -0.11
Sox3P53784 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Sox3P53784 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.38□□□□□ -0.11
Sox3P53784 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.38□□□□□ -0.11
Sox3P53784 Gm18622-201ENSMUST00000219361 595 ntBASIC14.38□□□□□ -0.11
Sox3P53784 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.38□□□□□ -0.11
Sox3P53784 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox3P53784 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sox3P53784 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.38□□□□□ -0.11
Sox3P53784 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox3P53784 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox3P53784 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.37□□□□□ -0.11
Sox3P53784 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.37□□□□□ -0.11
Sox3P53784 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sox3P53784 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox3P53784 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sox3P53784 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox3P53784 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sox3P53784 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox3P53784 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox3P53784 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox3P53784 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox3P53784 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.36□□□□□ -0.11
Sox3P53784 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox3P53784 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.36□□□□□ -0.11
Sox3P53784 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sox3P53784 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox3P53784 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox3P53784 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox3P53784 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Sox3P53784 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms