Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox1P53783 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox1P53783 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sox1P53783 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.26■□□□□ 0.03
Sox1P53783 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Gm27572-201ENSMUST00000183702 255 ntBASIC15.26■□□□□ 0.03
Sox1P53783 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox1P53783 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox1P53783 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox1P53783 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox1P53783 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Sox1P53783 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Sox1P53783 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox1P53783 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sox1P53783 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox1P53783 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox1P53783 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox1P53783 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox1P53783 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Gm12176-201ENSMUST00000121420 875 ntBASIC15.24■□□□□ 0.03
Sox1P53783 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.24■□□□□ 0.03
Sox1P53783 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Gm6244-201ENSMUST00000178732 841 ntBASIC15.24■□□□□ 0.03
Sox1P53783 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.24■□□□□ 0.03
Sox1P53783 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.24■□□□□ 0.03
Sox1P53783 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox1P53783 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox1P53783 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Sox1P53783 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox1P53783 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox1P53783 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Sox1P53783 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox1P53783 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.23■□□□□ 0.03
Sox1P53783 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox1P53783 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms