Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lhx3P50481 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lhx3P50481 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Lhx3P50481 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Lhx3P50481 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.19■□□□□ 0.02
Lhx3P50481 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Gm6973-201ENSMUST00000117080 721 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lhx3P50481 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.19■□□□□ 0.02
Lhx3P50481 Gm15483-201ENSMUST00000120338 456 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.19■□□□□ 0.02
Lhx3P50481 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lhx3P50481 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lhx3P50481 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Lhx3P50481 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx3P50481 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lhx3P50481 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.18■□□□□ 0.02
Lhx3P50481 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Lhx3P50481 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Lhx3P50481 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx3P50481 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Lhx3P50481 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.17■□□□□ 0.02
Lhx3P50481 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.17■□□□□ 0.02
Lhx3P50481 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.17■□□□□ 0.02
Lhx3P50481 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lhx3P50481 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.17■□□□□ 0.02
Lhx3P50481 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Lhx3P50481 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lhx3P50481 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lhx3P50481 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.16■□□□□ 0.02
Lhx3P50481 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.16■□□□□ 0.02
Lhx3P50481 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.16■□□□□ 0.02
Lhx3P50481 Rprl2-201ENSMUST00000157150 290 ntBASIC15.16■□□□□ 0.02
Lhx3P50481 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.16■□□□□ 0.02
Lhx3P50481 Gm18057-201ENSMUST00000208220 503 ntBASIC15.16■□□□□ 0.02
Lhx3P50481 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.16■□□□□ 0.02
Lhx3P50481 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.16■□□□□ 0.02
Lhx3P50481 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms