Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prox1P48437 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prox1P48437 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Prox1P48437 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Prox1P48437 Gm25406-201ENSMUST00000157599 105 ntBASIC14.44□□□□□ -0.1
Prox1P48437 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Prox1P48437 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Prox1P48437 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prox1P48437 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.43□□□□□ -0.1
Prox1P48437 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.43□□□□□ -0.1
Prox1P48437 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.43□□□□□ -0.1
Prox1P48437 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.43□□□□□ -0.1
Prox1P48437 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Prox1P48437 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Prox1P48437 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.43□□□□□ -0.1
Prox1P48437 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.43□□□□□ -0.1
Prox1P48437 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prox1P48437 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Prox1P48437 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Gm13312-201ENSMUST00000119631 718 ntBASIC14.42□□□□□ -0.1
Prox1P48437 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.42□□□□□ -0.1
Prox1P48437 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.42□□□□□ -0.1
Prox1P48437 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Prox1P48437 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.42□□□□□ -0.1
Prox1P48437 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prox1P48437 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prox1P48437 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prox1P48437 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prox1P48437 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prox1P48437 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prox1P48437 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.41□□□□□ -0.1
Prox1P48437 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Prox1P48437 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms