Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.59□□□□□ -0.39
Hmx3P42581 Gm10052-201ENSMUST00000168019 960 ntBASIC12.59□□□□□ -0.39
Hmx3P42581 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Gm7729-201ENSMUST00000050143 801 ntBASIC12.59□□□□□ -0.39
Hmx3P42581 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmx3P42581 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmx3P42581 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmx3P42581 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmx3P42581 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Hmx3P42581 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmx3P42581 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmx3P42581 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.58□□□□□ -0.39
Hmx3P42581 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Hmx3P42581 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Gm9013-201ENSMUST00000132939 882 ntBASIC12.58□□□□□ -0.4
Hmx3P42581 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.58□□□□□ -0.4
Hmx3P42581 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmx3P42581 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.57□□□□□ -0.4
Hmx3P42581 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hmx3P42581 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.57□□□□□ -0.4
Hmx3P42581 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Hmx3P42581 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmx3P42581 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hmx3P42581 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmx3P42581 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hmx3P42581 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmx3P42581 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms