Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.39■□□□□ 0.05
Cxcl12P40224 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cxcl12P40224 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Cxcl12P40224 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.38■□□□□ 0.05
Cxcl12P40224 Gm45841-201ENSMUST00000207700 164 ntBASIC15.38■□□□□ 0.05
Cxcl12P40224 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cxcl12P40224 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cxcl12P40224 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cxcl12P40224 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Gm12742-201ENSMUST00000117326 410 ntBASIC15.37■□□□□ 0.05
Cxcl12P40224 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Gm27892-201ENSMUST00000185017 106 ntBASIC15.37■□□□□ 0.05
Cxcl12P40224 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.37■□□□□ 0.05
Cxcl12P40224 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cxcl12P40224 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Cxcl12P40224 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Cxcl12P40224 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Gm5035-201ENSMUST00000215581 927 ntBASIC15.36■□□□□ 0.05
Cxcl12P40224 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.36■□□□□ 0.05
Cxcl12P40224 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cxcl12P40224 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Cxcl12P40224 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cxcl12P40224 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.35■□□□□ 0.05
Cxcl12P40224 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms