Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk2P38575 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Gm27628-201ENSMUST00000184911 107 ntBASIC13.17□□□□□ -0.3
Upk2P38575 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.17□□□□□ -0.3
Upk2P38575 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.17□□□□□ -0.3
Upk2P38575 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk2P38575 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Upk2P38575 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.17□□□□□ -0.3
Upk2P38575 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Gm12350-201ENSMUST00000121208 462 ntBASIC13.16□□□□□ -0.3
Upk2P38575 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.16□□□□□ -0.3
Upk2P38575 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.16□□□□□ -0.3
Upk2P38575 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk2P38575 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk2P38575 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Upk2P38575 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Upk2P38575 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.15□□□□□ -0.3
Upk2P38575 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk2P38575 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk2P38575 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.15□□□□□ -0.31
Upk2P38575 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Upk2P38575 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Upk2P38575 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.15□□□□□ -0.31
Upk2P38575 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.14□□□□□ -0.31
Upk2P38575 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Upk2P38575 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Upk2P38575 Gm27300-201ENSMUST00000184085 97 ntBASIC13.14□□□□□ -0.31
Upk2P38575 Gm27335-201ENSMUST00000184758 97 ntBASIC13.14□□□□□ -0.31
Upk2P38575 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.14□□□□□ -0.31
Upk2P38575 Gm2651-201ENSMUST00000203560 838 ntBASIC13.14□□□□□ -0.31
Upk2P38575 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms