Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.41■□□□□ 0.22
Sox5P35710 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sox5P35710 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox5P35710 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox5P35710 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.4■□□□□ 0.22
Sox5P35710 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox5P35710 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.4■□□□□ 0.22
Sox5P35710 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox5P35710 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.4■□□□□ 0.22
Sox5P35710 Gm11780-201ENSMUST00000136880 516 ntBASIC16.4■□□□□ 0.22
Sox5P35710 Gm43767-201ENSMUST00000198933 381 ntBASIC16.4■□□□□ 0.22
Sox5P35710 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.4■□□□□ 0.22
Sox5P35710 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox5P35710 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox5P35710 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox5P35710 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox5P35710 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox5P35710 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sox5P35710 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sox5P35710 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox5P35710 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Sox5P35710 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Sox5P35710 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.39■□□□□ 0.21
Sox5P35710 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.39■□□□□ 0.21
Sox5P35710 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.39■□□□□ 0.21
Sox5P35710 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.39■□□□□ 0.21
Sox5P35710 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.39■□□□□ 0.21
Sox5P35710 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sox5P35710 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox5P35710 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sox5P35710 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sox5P35710 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.38■□□□□ 0.21
Sox5P35710 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms