Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nedd8P29595 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.92□□□□□ -0.18
Nedd8P29595 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.91□□□□□ -0.18
Nedd8P29595 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Nedd8P29595 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.91□□□□□ -0.18
Nedd8P29595 Gm10698-201ENSMUST00000182663 604 ntBASIC13.91□□□□□ -0.18
Nedd8P29595 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nedd8P29595 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nedd8P29595 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
Nedd8P29595 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.9□□□□□ -0.18
Nedd8P29595 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.9□□□□□ -0.18
Nedd8P29595 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nedd8P29595 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.9□□□□□ -0.18
Nedd8P29595 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.9□□□□□ -0.18
Nedd8P29595 Mir6404-201ENSMUST00000183699 94 ntBASIC13.9□□□□□ -0.18
Nedd8P29595 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.9□□□□□ -0.18
Nedd8P29595 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nedd8P29595 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.89□□□□□ -0.19
Nedd8P29595 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.89□□□□□ -0.19
Nedd8P29595 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Nedd8P29595 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.89□□□□□ -0.19
Nedd8P29595 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.89□□□□□ -0.19
Nedd8P29595 Gm20049-201ENSMUST00000219950 730 ntBASIC13.89□□□□□ -0.19
Nedd8P29595 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.89□□□□□ -0.19
Nedd8P29595 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nedd8P29595 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nedd8P29595 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.88□□□□□ -0.19
Nedd8P29595 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nedd8P29595 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Nedd8P29595 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms