Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.42□□□□□ -0.1
BdnfP21237 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BdnfP21237 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
BdnfP21237 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Gm15372-201ENSMUST00000120729 834 ntBASIC14.41□□□□□ -0.1
BdnfP21237 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.41□□□□□ -0.1
BdnfP21237 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.41□□□□□ -0.1
BdnfP21237 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.41□□□□□ -0.1
BdnfP21237 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.41□□□□□ -0.1
BdnfP21237 Gm17807-201ENSMUST00000186869 298 ntBASIC14.41□□□□□ -0.1
BdnfP21237 Gm19164-201ENSMUST00000210667 640 ntBASIC14.41□□□□□ -0.1
BdnfP21237 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.41□□□□□ -0.1
BdnfP21237 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.41□□□□□ -0.1
BdnfP21237 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BdnfP21237 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BdnfP21237 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BdnfP21237 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
BdnfP21237 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BdnfP21237 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.4□□□□□ -0.1
BdnfP21237 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.4□□□□□ -0.1
BdnfP21237 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
BdnfP21237 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
BdnfP21237 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BdnfP21237 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BdnfP21237 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.39□□□□□ -0.11
BdnfP21237 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Gm12497-201ENSMUST00000138778 237 ntBASIC14.39□□□□□ -0.11
BdnfP21237 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.39□□□□□ -0.11
BdnfP21237 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.39□□□□□ -0.11
BdnfP21237 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
BdnfP21237 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BdnfP21237 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms