Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Gm4875-201ENSMUST00000118257 786 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Gm6222-201ENSMUST00000120787 396 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Gm46209-201ENSMUST00000217912 553 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.35■□□□□ 0.69
Hoxc9P09633 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc9P09633 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc9P09633 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxc9P09633 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm6218-201ENSMUST00000219812 628 ntBASIC19.34■□□□□ 0.69
Hoxc9P09633 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.34■□□□□ 0.69
Hoxc9P09633 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxc9P09633 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Hoxc9P09633 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc9P09633 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc9P09633 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc9P09633 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc9P09633 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc9P09633 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc9P09633 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Hoxc9P09633 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Hoxc9P09633 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc9P09633 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Hoxc9P09633 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Hoxc9P09633 Gm15653-201ENSMUST00000119247 907 ntBASIC19.32■□□□□ 0.68
Hoxc9P09633 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Olfr286-202ENSMUST00000205305 969 ntBASIC19.32■□□□□ 0.68
Hoxc9P09633 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hoxc9P09633 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc9P09633 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hoxc9P09633 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxc9P09633 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc9P09633 Asic1-205ENSMUST00000228185 1818 ntBASIC19.31■□□□□ 0.68
Hoxc9P09633 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Hoxc9P09633 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms