Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IghmP01872 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.06□□□□□ -0.16
IghmP01872 Gm12008-201ENSMUST00000117791 755 ntBASIC14.06□□□□□ -0.16
IghmP01872 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.06□□□□□ -0.16
IghmP01872 Gm6376-201ENSMUST00000209407 580 ntBASIC14.06□□□□□ -0.16
IghmP01872 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.06□□□□□ -0.16
IghmP01872 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.06□□□□□ -0.16
IghmP01872 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.06□□□□□ -0.16
IghmP01872 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IghmP01872 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
IghmP01872 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
IghmP01872 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IghmP01872 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.05□□□□□ -0.16
IghmP01872 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Gm6550-201ENSMUST00000187574 993 ntBASIC14.05□□□□□ -0.16
IghmP01872 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IghmP01872 Gm7787-201ENSMUST00000216858 688 ntBASIC14.05□□□□□ -0.16
IghmP01872 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.05□□□□□ -0.16
IghmP01872 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
IghmP01872 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IghmP01872 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
IghmP01872 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Gm24589-201ENSMUST00000116692 94 ntBASIC14.04□□□□□ -0.16
IghmP01872 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.04□□□□□ -0.16
IghmP01872 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
IghmP01872 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IghmP01872 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IghmP01872 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IghmP01872 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IghmP01872 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
IghmP01872 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IghmP01872 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IghmP01872 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IghmP01872 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IghmP01872 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms