Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ShdO88834 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.34■□□□□ 0.05
ShdO88834 Gm5364-201ENSMUST00000216789 889 ntBASIC15.34■□□□□ 0.05
ShdO88834 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.34■□□□□ 0.05
ShdO88834 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.34■□□□□ 0.05
ShdO88834 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShdO88834 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShdO88834 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ShdO88834 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShdO88834 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
ShdO88834 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.33■□□□□ 0.04
ShdO88834 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.33■□□□□ 0.04
ShdO88834 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.33■□□□□ 0.04
ShdO88834 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.33■□□□□ 0.04
ShdO88834 Gm27525-201ENSMUST00000184465 107 ntBASIC15.33■□□□□ 0.04
ShdO88834 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.33■□□□□ 0.04
ShdO88834 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.33■□□□□ 0.04
ShdO88834 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ShdO88834 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.33■□□□□ 0.04
ShdO88834 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.33■□□□□ 0.04
ShdO88834 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShdO88834 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ShdO88834 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ShdO88834 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.32■□□□□ 0.04
ShdO88834 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.32■□□□□ 0.04
ShdO88834 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShdO88834 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ShdO88834 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.31■□□□□ 0.04
ShdO88834 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.31■□□□□ 0.04
ShdO88834 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
ShdO88834 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ShdO88834 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.31■□□□□ 0.04
ShdO88834 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.31■□□□□ 0.04
ShdO88834 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Psmb5-202ENSMUST00000227257 622 ntBASIC15.31■□□□□ 0.04
ShdO88834 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
ShdO88834 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.31■□□□□ 0.04
ShdO88834 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.31■□□□□ 0.04
ShdO88834 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.31■□□□□ 0.04
ShdO88834 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ShdO88834 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ShdO88834 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShdO88834 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShdO88834 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShdO88834 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ShdO88834 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms