Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IkbkbO88351 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IkbkbO88351 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.6■□□□□ 0.25
IkbkbO88351 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
IkbkbO88351 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.6■□□□□ 0.25
IkbkbO88351 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.6■□□□□ 0.25
IkbkbO88351 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.6■□□□□ 0.25
IkbkbO88351 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.6■□□□□ 0.25
IkbkbO88351 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IkbkbO88351 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.6■□□□□ 0.25
IkbkbO88351 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IkbkbO88351 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.59■□□□□ 0.25
IkbkbO88351 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.59■□□□□ 0.25
IkbkbO88351 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
IkbkbO88351 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.59■□□□□ 0.25
IkbkbO88351 Gm2213-201ENSMUST00000197485 688 ntBASIC16.59■□□□□ 0.25
IkbkbO88351 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.59■□□□□ 0.25
IkbkbO88351 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IkbkbO88351 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IkbkbO88351 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IkbkbO88351 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.58■□□□□ 0.24
IkbkbO88351 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IkbkbO88351 Gm4995-201ENSMUST00000117247 432 ntBASIC16.58■□□□□ 0.24
IkbkbO88351 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.58■□□□□ 0.24
IkbkbO88351 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.58■□□□□ 0.24
IkbkbO88351 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.58■□□□□ 0.24
IkbkbO88351 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
IkbkbO88351 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IkbkbO88351 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IkbkbO88351 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.57■□□□□ 0.24
IkbkbO88351 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
IkbkbO88351 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms