Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nid2O88322 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nid2O88322 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.32■□□□□ 0.68
Nid2O88322 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nid2O88322 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.31■□□□□ 0.68
Nid2O88322 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.31■□□□□ 0.68
Nid2O88322 Gm45751-201ENSMUST00000210185 1573 ntBASIC19.31■□□□□ 0.68
Nid2O88322 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nid2O88322 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.31■□□□□ 0.68
Nid2O88322 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Gm43630-201ENSMUST00000201550 776 ntBASIC19.31■□□□□ 0.68
Nid2O88322 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.31■□□□□ 0.68
Nid2O88322 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.31■□□□□ 0.68
Nid2O88322 AC165157.4-201ENSMUST00000220587 139 ntBASIC19.31■□□□□ 0.68
Nid2O88322 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nid2O88322 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nid2O88322 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.3■□□□□ 0.68
Nid2O88322 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nid2O88322 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.3■□□□□ 0.68
Nid2O88322 Gm8749-201ENSMUST00000117737 331 ntBASIC19.3■□□□□ 0.68
Nid2O88322 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nid2O88322 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nid2O88322 Mir6392-201ENSMUST00000184924 108 ntBASIC19.3■□□□□ 0.68
Nid2O88322 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nid2O88322 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nid2O88322 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nid2O88322 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.29■□□□□ 0.68
Nid2O88322 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nid2O88322 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nid2O88322 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nid2O88322 AY702102-202ENSMUST00000194651 1173 ntBASIC19.29■□□□□ 0.68
Nid2O88322 AA619741-201ENSMUST00000195095 646 ntBASIC19.29■□□□□ 0.68
Nid2O88322 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.29■□□□□ 0.68
Nid2O88322 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 App-207ENSMUST00000227737 2827 ntBASIC19.29■□□□□ 0.68
Nid2O88322 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nid2O88322 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.29■□□□□ 0.68
Nid2O88322 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nid2O88322 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.29■□□□□ 0.68
Nid2O88322 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Nid2O88322 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Gm12960-201ENSMUST00000120017 1066 ntBASIC19.28■□□□□ 0.68
Nid2O88322 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.28■□□□□ 0.68
Nid2O88322 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.28■□□□□ 0.68
Nid2O88322 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nid2O88322 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.28■□□□□ 0.68
Nid2O88322 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms