Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Carlr-201ENSMUST00000181515 2574 ntBASIC13.62□□□□□ -0.23
Pdlim3O70209 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim3O70209 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim3O70209 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.62□□□□□ -0.23
Pdlim3O70209 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Gm23547-201ENSMUST00000158210 271 ntBASIC13.62□□□□□ -0.23
Pdlim3O70209 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdlim3O70209 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.62□□□□□ -0.23
Pdlim3O70209 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.62□□□□□ -0.23
Pdlim3O70209 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Pdlim3O70209 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdlim3O70209 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdlim3O70209 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdlim3O70209 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdlim3O70209 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim3O70209 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.6□□□□□ -0.23
Pdlim3O70209 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pdlim3O70209 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Gm12008-201ENSMUST00000117791 755 ntBASIC13.6□□□□□ -0.23
Pdlim3O70209 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.6□□□□□ -0.23
Pdlim3O70209 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Gm7506-201ENSMUST00000207758 815 ntBASIC13.6□□□□□ -0.23
Pdlim3O70209 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.6□□□□□ -0.23
Pdlim3O70209 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdlim3O70209 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms