Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Asic1-205ENSMUST00000228185 1818 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Gm15483-201ENSMUST00000120338 456 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.47□□□□□ -0.09
Cacna1bO55017 Gm45384-201ENSMUST00000210451 277 ntBASIC14.47□□□□□ -0.09
Cacna1bO55017 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.47□□□□□ -0.09
Cacna1bO55017 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cacna1bO55017 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cacna1bO55017 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.46□□□□□ -0.09
Cacna1bO55017 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.46□□□□□ -0.09
Cacna1bO55017 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.46□□□□□ -0.09
Cacna1bO55017 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.46□□□□□ -0.09
Cacna1bO55017 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cacna1bO55017 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Cacna1bO55017 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.46□□□□□ -0.1
Cacna1bO55017 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.46□□□□□ -0.1
Cacna1bO55017 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.46□□□□□ -0.1
Cacna1bO55017 Gm7775-201ENSMUST00000218871 853 ntBASIC14.46□□□□□ -0.1
Cacna1bO55017 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cacna1bO55017 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cacna1bO55017 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cacna1bO55017 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Gm5566-201ENSMUST00000116118 459 ntBASIC14.45□□□□□ -0.1
Cacna1bO55017 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.45□□□□□ -0.1
Cacna1bO55017 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cacna1bO55017 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Cacna1bO55017 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.44□□□□□ -0.1
Cacna1bO55017 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cacna1bO55017 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cacna1bO55017 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms