Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.99■□□□□ 0.15
Kcnu1O54982 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Kcnu1O54982 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.99■□□□□ 0.15
Kcnu1O54982 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Kcnu1O54982 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Kcnu1O54982 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.98■□□□□ 0.15
Kcnu1O54982 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Mir8098-201ENSMUST00000184011 137 ntBASIC15.98■□□□□ 0.15
Kcnu1O54982 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Gm18246-201ENSMUST00000221023 728 ntBASIC15.98■□□□□ 0.15
Kcnu1O54982 AV026068-213ENSMUST00000223675 1171 ntBASIC15.98■□□□□ 0.15
Kcnu1O54982 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.98■□□□□ 0.15
Kcnu1O54982 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Kcnu1O54982 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Kcnu1O54982 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Gm7787-201ENSMUST00000216858 688 ntBASIC15.97■□□□□ 0.15
Kcnu1O54982 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Kcnu1O54982 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Kcnu1O54982 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.96■□□□□ 0.15
Kcnu1O54982 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Kcnu1O54982 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.96■□□□□ 0.15
Kcnu1O54982 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.96■□□□□ 0.15
Kcnu1O54982 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.96■□□□□ 0.15
Kcnu1O54982 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.96■□□□□ 0.15
Kcnu1O54982 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Kcnu1O54982 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Kcnu1O54982 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Kcnu1O54982 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms