Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarce1O54941 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarce1O54941 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smarce1O54941 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Smarce1O54941 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.85■□□□□ 0.45
Smarce1O54941 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.85■□□□□ 0.45
Smarce1O54941 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Smarce1O54941 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarce1O54941 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Smarce1O54941 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smarce1O54941 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.84■□□□□ 0.45
Smarce1O54941 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarce1O54941 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smarce1O54941 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarce1O54941 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Smarce1O54941 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.83■□□□□ 0.45
Smarce1O54941 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarce1O54941 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Gm11780-201ENSMUST00000136880 516 ntBASIC17.83■□□□□ 0.44
Smarce1O54941 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Gm4535-201ENSMUST00000182274 558 ntBASIC17.83■□□□□ 0.44
Smarce1O54941 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.83■□□□□ 0.44
Smarce1O54941 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Gm10355-201ENSMUST00000097146 517 ntBASIC17.83■□□□□ 0.44
Smarce1O54941 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Smarce1O54941 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarce1O54941 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.83■□□□□ 0.44
Smarce1O54941 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Smarce1O54941 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.82■□□□□ 0.44
Smarce1O54941 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Gm18489-201ENSMUST00000172565 551 ntBASIC17.82■□□□□ 0.44
Smarce1O54941 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.82■□□□□ 0.44
Smarce1O54941 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.82■□□□□ 0.44
Smarce1O54941 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.82■□□□□ 0.44
Smarce1O54941 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarce1O54941 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms