Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Matn3O35701 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Matn3O35701 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Matn3O35701 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Gm10052-201ENSMUST00000168019 960 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Matn3O35701 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Gm7729-201ENSMUST00000050143 801 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Matn3O35701 Gm10819-201ENSMUST00000099988 561 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Matn3O35701 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Matn3O35701 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.67□□□□□ -0.22
Matn3O35701 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Matn3O35701 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Matn3O35701 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.66□□□□□ -0.22
Matn3O35701 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.66□□□□□ -0.22
Matn3O35701 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.66□□□□□ -0.22
Matn3O35701 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Matn3O35701 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Matn3O35701 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Matn3O35701 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Matn3O35701 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Matn3O35701 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Gm18101-201ENSMUST00000215769 548 ntBASIC13.65□□□□□ -0.22
Matn3O35701 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Matn3O35701 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms