Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Efnb3O35393 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.89□□□□□ -0.51
Efnb3O35393 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.89□□□□□ -0.51
Efnb3O35393 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.89□□□□□ -0.51
Efnb3O35393 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Efnb3O35393 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.89□□□□□ -0.51
Efnb3O35393 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.89□□□□□ -0.51
Efnb3O35393 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
Efnb3O35393 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Efnb3O35393 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Efnb3O35393 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Efnb3O35393 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.88□□□□□ -0.51
Efnb3O35393 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.88□□□□□ -0.51
Efnb3O35393 Gm19164-201ENSMUST00000210667 640 ntBASIC11.88□□□□□ -0.51
Efnb3O35393 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Efnb3O35393 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Efnb3O35393 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Efnb3O35393 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Efnb3O35393 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Efnb3O35393 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Efnb3O35393 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.87□□□□□ -0.51
Efnb3O35393 Gm23547-201ENSMUST00000158210 271 ntBASIC11.87□□□□□ -0.51
Efnb3O35393 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.87□□□□□ -0.51
Efnb3O35393 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.87□□□□□ -0.51
Efnb3O35393 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms