Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.99□□□□□ -0.33
Gfra3O35118 Gm16198-201ENSMUST00000118766 670 ntBASIC12.99□□□□□ -0.33
Gfra3O35118 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.99□□□□□ -0.33
Gfra3O35118 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.99□□□□□ -0.33
Gfra3O35118 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Gfra3O35118 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gfra3O35118 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.99□□□□□ -0.33
Gfra3O35118 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gfra3O35118 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.98□□□□□ -0.33
Gfra3O35118 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gfra3O35118 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.98□□□□□ -0.33
Gfra3O35118 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.98□□□□□ -0.33
Gfra3O35118 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.98□□□□□ -0.33
Gfra3O35118 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.98□□□□□ -0.33
Gfra3O35118 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.98□□□□□ -0.33
Gfra3O35118 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Gfra3O35118 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gfra3O35118 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gfra3O35118 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gfra3O35118 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Gfra3O35118 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.97□□□□□ -0.33
Gfra3O35118 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.97□□□□□ -0.33
Gfra3O35118 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.97□□□□□ -0.33
Gfra3O35118 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.97□□□□□ -0.33
Gfra3O35118 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.97□□□□□ -0.33
Gfra3O35118 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.97□□□□□ -0.33
Gfra3O35118 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.97□□□□□ -0.33
Gfra3O35118 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.97□□□□□ -0.33
Gfra3O35118 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.97□□□□□ -0.33
Gfra3O35118 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gfra3O35118 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gfra3O35118 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gfra3O35118 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Gfra3O35118 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Gfra3O35118 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Gfra3O35118 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gfra3O35118 Gm9385-201ENSMUST00000117563 472 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.96□□□□□ -0.33
Gfra3O35118 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.96□□□□□ -0.33
Gfra3O35118 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.96□□□□□ -0.33
Gfra3O35118 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Gfra3O35118 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.96□□□□□ -0.33
Gfra3O35118 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms