Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trove2O08848 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trove2O08848 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trove2O08848 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trove2O08848 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.44■□□□□ 0.06
Trove2O08848 Rprl3-201ENSMUST00000157400 290 ntBASIC15.44■□□□□ 0.06
Trove2O08848 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.44■□□□□ 0.06
Trove2O08848 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.44■□□□□ 0.06
Trove2O08848 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.44■□□□□ 0.06
Trove2O08848 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.44■□□□□ 0.06
Trove2O08848 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trove2O08848 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trove2O08848 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.44■□□□□ 0.06
Trove2O08848 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trove2O08848 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trove2O08848 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Trove2O08848 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trove2O08848 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Olfr129-201ENSMUST00000122318 993 ntBASIC15.43■□□□□ 0.06
Trove2O08848 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.43■□□□□ 0.06
Trove2O08848 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.43■□□□□ 0.06
Trove2O08848 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trove2O08848 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trove2O08848 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.42■□□□□ 0.06
Trove2O08848 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trove2O08848 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gm6257-201ENSMUST00000163864 910 ntBASIC15.42■□□□□ 0.06
Trove2O08848 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.42■□□□□ 0.06
Trove2O08848 Gm7977-201ENSMUST00000193787 748 ntBASIC15.42■□□□□ 0.06
Trove2O08848 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.42■□□□□ 0.06
Trove2O08848 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trove2O08848 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Trove2O08848 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.42■□□□□ 0.06
Trove2O08848 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trove2O08848 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trove2O08848 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms