Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm15590-201ENSMUST00000078419 552 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Raet1bO08603 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.31□□□□□ -0.28
Raet1bO08603 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Raet1bO08603 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Raet1bO08603 Efs-202ENSMUST00000227037 2540 ntBASIC13.31□□□□□ -0.28
Raet1bO08603 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Raet1bO08603 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Raet1bO08603 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Raet1bO08603 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.31□□□□□ -0.28
Raet1bO08603 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Raet1bO08603 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.31□□□□□ -0.28
Raet1bO08603 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.31□□□□□ -0.28
Raet1bO08603 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.31□□□□□ -0.28
Raet1bO08603 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Raet1bO08603 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.3□□□□□ -0.28
Raet1bO08603 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.3□□□□□ -0.28
Raet1bO08603 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.3□□□□□ -0.28
Raet1bO08603 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.3□□□□□ -0.28
Raet1bO08603 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Raet1bO08603 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Raet1bO08603 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Raet1bO08603 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Raet1bO08603 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Raet1bO08603 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.29□□□□□ -0.28
Raet1bO08603 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.29□□□□□ -0.28
Raet1bO08603 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Raet1bO08603 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms