Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm15483-201ENSMUST00000120338 456 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NpcdF8VQB8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm45668-201ENSMUST00000211271 493 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Gm15823-201ENSMUST00000064305 670 ntBASIC18.01■□□□□ 0.47
NpcdF8VQB8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NpcdF8VQB8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18■□□□□ 0.47
NpcdF8VQB8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Gm12091-201ENSMUST00000146791 830 ntBASIC18■□□□□ 0.47
NpcdF8VQB8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NpcdF8VQB8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18■□□□□ 0.47
NpcdF8VQB8 Gm45059-201ENSMUST00000205558 1077 ntBASIC18■□□□□ 0.47
NpcdF8VQB8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18■□□□□ 0.47
NpcdF8VQB8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NpcdF8VQB8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NpcdF8VQB8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.99■□□□□ 0.47
NpcdF8VQB8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Gm27920-201ENSMUST00000183953 96 ntBASIC17.99■□□□□ 0.47
NpcdF8VQB8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NpcdF8VQB8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm14042-201ENSMUST00000120139 833 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
NpcdF8VQB8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 AY702102-202ENSMUST00000194651 1173 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms