Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc7bE9Q9Y3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm8097-201ENSMUST00000117903 829 ntBASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc7bE9Q9Y3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm15358-201ENSMUST00000119249 520 ntBASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc7bE9Q9Y3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.05□□□□□ -0.16
Ccdc7bE9Q9Y3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms