Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Gm5177-201ENSMUST00000183092 997 ntBASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Gm17968-201ENSMUST00000194902 784 ntBASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cpsf4lE9Q2N0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Cpsf4lE9Q2N0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Gm11779-201ENSMUST00000118541 368 ntBASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4lE9Q2N0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Gm2272-201ENSMUST00000194903 582 ntBASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Thap2-203ENSMUST00000218989 527 ntBASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4lE9Q2N0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms