Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm14722-201ENSMUST00000118943 689 ntBASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usf3B2RUQ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Efs-202ENSMUST00000227037 2540 ntBASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm15358-201ENSMUST00000119249 520 ntBASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm37153-201ENSMUST00000193637 231 ntBASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usf3B2RUQ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms