Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Gm29787-201ENSMUST00000222129 849 ntBASIC11.24□□□□□ -0.61
Col6a5A6H584 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.24□□□□□ -0.61
Col6a5A6H584 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a5A6H584 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.23□□□□□ -0.61
Col6a5A6H584 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm43118-201ENSMUST00000199149 775 ntBASIC11.23□□□□□ -0.61
Col6a5A6H584 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.23□□□□□ -0.61
Col6a5A6H584 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm24196-201ENSMUST00000179161 110 ntBASIC11.23□□□□□ -0.61
Col6a5A6H584 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.23□□□□□ -0.61
Col6a5A6H584 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Col6a5A6H584 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a5A6H584 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm13461-201ENSMUST00000120980 662 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm27839-201ENSMUST00000184242 106 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm19184-201ENSMUST00000196798 928 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Mir125a-201ENSMUST00000083545 68 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a5A6H584 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a5A6H584 Gm38158-201ENSMUST00000194617 339 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.22□□□□□ -0.61
Col6a5A6H584 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC11.21□□□□□ -0.61
Col6a5A6H584 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms