Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm28729A0A1B0GSW2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm13823-201ENSMUST00000119930 345 ntBASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm5479-201ENSMUST00000160578 435 ntBASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Mir8102-201ENSMUST00000184148 139 ntBASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28729A0A1B0GSW2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm28729A0A1B0GSW2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm28729A0A1B0GSW2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm27533-201ENSMUST00000183800 152 ntBASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm5186-201ENSMUST00000218781 920 ntBASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28729A0A1B0GSW2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm5866-201ENSMUST00000177881 973 ntBASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm25144-201ENSMUST00000179561 110 ntBASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm25352-201ENSMUST00000179815 110 ntBASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm9063-201ENSMUST00000223299 582 ntBASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28729A0A1B0GSW2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms