Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rprl3-201ENSMUST00000157400 290 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm23634-201ENSMUST00000175071 91 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm44454-201ENSMUST00000198541 138 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm19164-201ENSMUST00000210667 640 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm9172-201ENSMUST00000212092 954 ntBASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms