Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6d-5A0A075B6B9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6d-5A0A075B6B9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav6d-5A0A075B6B9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms