Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Gm1401-201ENSMUST00000122048 772 ntBASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Gm44771-201ENSMUST00000206975 626 ntBASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav6-4A0A075B6B4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gm14140-201ENSMUST00000119999 995 ntBASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gm27300-201ENSMUST00000184085 97 ntBASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gm27335-201ENSMUST00000184758 97 ntBASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Celf4-206ENSMUST00000224553 1729 ntBASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Psmb5-202ENSMUST00000227257 622 ntBASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-4A0A075B6B4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Gm18206-201ENSMUST00000207027 926 ntBASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms