Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gm25745-201ENSMUST00000174945 133 ntBASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Celf4-206ENSMUST00000224553 1729 ntBASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15d-1-dv6d-1A0A075B624 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm15165-201ENSMUST00000118140 502 ntBASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15d-1-dv6d-1A0A075B624 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms