Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav4n-4A0A075B615 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav4n-4A0A075B615 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gm11539-201ENSMUST00000119837 557 ntBASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gm18666-201ENSMUST00000190039 958 ntBASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav4n-4A0A075B615 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms