Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Gm6296-201ENSMUST00000222599 943 ntBASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9-1A0A075B601 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Ank2-226ENSMUST00000189368 339 ntBASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9-1A0A075B601 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9-1A0A075B601 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms