Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm27300-201ENSMUST00000184085 97 ntBASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm27335-201ENSMUST00000184758 97 ntBASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ighv1-55A0A075B5W6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ighv1-55A0A075B5W6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms