Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3550W4VSN7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm11780-201ENSMUST00000136880 516 ntBASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm4535-201ENSMUST00000182274 558 ntBASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Birc2-201ENSMUST00000054878 378 ntBASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Gm10355-201ENSMUST00000097146 517 ntBASIC12.78□□□□□ -0.36
Gm3550W4VSN7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm3550W4VSN7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3550W4VSN7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Gm43347-201ENSMUST00000200226 580 ntBASIC12.77□□□□□ -0.37
Gm3550W4VSN7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3550W4VSN7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.76□□□□□ -0.37
Gm3550W4VSN7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gm27646-201ENSMUST00000183989 110 ntBASIC12.76□□□□□ -0.37
Gm3550W4VSN7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms