Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Gm9824-201ENSMUST00000178707 561 ntBASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcb1Q9Z0H3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Gm27920-201ENSMUST00000183953 96 ntBASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcb1Q9Z0H3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Gm15483-201ENSMUST00000120338 456 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Smarcb1Q9Z0H3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Gm15693-201ENSMUST00000120470 637 ntBASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Gm22175-201ENSMUST00000175007 78 ntBASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.54■□□□□ 0.08
Smarcb1Q9Z0H3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms