Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Htra1Q9R118 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.98□□□□□ -0.17
Htra1Q9R118 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Htra1Q9R118 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Htra1Q9R118 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Htra1Q9R118 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.98□□□□□ -0.17
Htra1Q9R118 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.98□□□□□ -0.17
Htra1Q9R118 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Htra1Q9R118 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Htra1Q9R118 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Gm27742-201ENSMUST00000184667 60 ntBASIC13.97□□□□□ -0.17
Htra1Q9R118 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Htra1Q9R118 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Htra1Q9R118 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Htra1Q9R118 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.96□□□□□ -0.17
Htra1Q9R118 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.96□□□□□ -0.17
Htra1Q9R118 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Htra1Q9R118 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Htra1Q9R118 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.96□□□□□ -0.17
Htra1Q9R118 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Htra1Q9R118 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Htra1Q9R118 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Htra1Q9R118 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Htra1Q9R118 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Htra1Q9R118 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Htra1Q9R118 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Htra1Q9R118 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Rprl3-201ENSMUST00000157400 290 ntBASIC13.95□□□□□ -0.18
Htra1Q9R118 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Htra1Q9R118 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Htra1Q9R118 Gm27704-201ENSMUST00000185094 107 ntBASIC13.95□□□□□ -0.18
Htra1Q9R118 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.95□□□□□ -0.18
Htra1Q9R118 Gm33142-201ENSMUST00000193913 867 ntBASIC13.95□□□□□ -0.18
Htra1Q9R118 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms