Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Crlf1Q9JM58 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm11425-201ENSMUST00000119608 498 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Mir1897-201ENSMUST00000122581 272 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm9002-201ENSMUST00000178437 499 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm45841-201ENSMUST00000207700 164 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm46209-201ENSMUST00000217912 553 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Gm9396-201ENSMUST00000076703 567 ntBASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Crlf1Q9JM58 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Gm3436-201ENSMUST00000179930 840 ntBASIC12□□□□□ -0.49
Crlf1Q9JM58 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Crlf1Q9JM58 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Crlf1Q9JM58 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms