Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm12895-201ENSMUST00000122214 226 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm33142-201ENSMUST00000193913 867 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rbfox1Q9JJ43 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rbfox1Q9JJ43 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Rbfox1Q9JJ43 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rbfox1Q9JJ43 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rbfox1Q9JJ43 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Rbfox1Q9JJ43 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Efs-202ENSMUST00000227037 2540 ntBASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rbfox1Q9JJ43 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rbfox1Q9JJ43 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms