Protein–RNA interactions for Protein: Q9JI38

Pus3, tRNA pseudouridine(38/39) synthase, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pus3Q9JI38 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.82■□□□□ 0.44
Pus3Q9JI38 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.82■□□□□ 0.44
Pus3Q9JI38 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.82■□□□□ 0.44
Pus3Q9JI38 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.82■□□□□ 0.44
Pus3Q9JI38 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pus3Q9JI38 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm13365-201ENSMUST00000121188 973 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm11745-201ENSMUST00000121669 448 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm16026-204ENSMUST00000162652 683 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm45612-201ENSMUST00000211320 160 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.81■□□□□ 0.44
Pus3Q9JI38 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pus3Q9JI38 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Chchd1-203ENSMUST00000224633 557 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pus3Q9JI38 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.8■□□□□ 0.44
Pus3Q9JI38 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.79■□□□□ 0.44
Pus3Q9JI38 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Gm11025-201ENSMUST00000140773 466 ntBASIC17.79■□□□□ 0.44
Pus3Q9JI38 Gm6736-201ENSMUST00000166583 948 ntBASIC17.79■□□□□ 0.44
Pus3Q9JI38 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.79■□□□□ 0.44
Pus3Q9JI38 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pus3Q9JI38 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pus3Q9JI38 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms