Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tubb3Q9ERD7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Tubb3Q9ERD7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tubb3Q9ERD7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tubb3Q9ERD7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gm5867-201ENSMUST00000063197 592 ntBASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tubb3Q9ERD7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms