Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.09■□□□□ 0.01
Vps35Q9EQH3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps35Q9EQH3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.08■□□□□ 0
Vps35Q9EQH3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vps35Q9EQH3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.08■□□□□ 0
Vps35Q9EQH3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vps35Q9EQH3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vps35Q9EQH3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.07■□□□□ 0
Vps35Q9EQH3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.07■□□□□ 0
Vps35Q9EQH3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vps35Q9EQH3 Gm43514-201ENSMUST00000198852 424 ntBASIC15.07■□□□□ 0
Vps35Q9EQH3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.07■□□□□ 0
Vps35Q9EQH3 AW822252-206ENSMUST00000208904 237 ntBASIC15.07■□□□□ 0
Vps35Q9EQH3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.07■□□□□ 0
Vps35Q9EQH3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps35Q9EQH3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vps35Q9EQH3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps35Q9EQH3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.06■□□□□ 0
Vps35Q9EQH3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps35Q9EQH3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.06■□□□□ 0
Vps35Q9EQH3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.06■□□□□ 0
Vps35Q9EQH3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps35Q9EQH3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps35Q9EQH3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps35Q9EQH3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps35Q9EQH3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm27300-201ENSMUST00000184085 97 ntBASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm27335-201ENSMUST00000184758 97 ntBASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.05■□□□□ -0
Vps35Q9EQH3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms