Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2aQ9DB34 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2aQ9DB34 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2aQ9DB34 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2aQ9DB34 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2aQ9DB34 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 BC037039-201ENSMUST00000192003 2205 ntBASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2aQ9DB34 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2aQ9DB34 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms