Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps33aQ9D2N9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.96■□□□□ 0.14
Vps33aQ9D2N9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vps33aQ9D2N9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vps33aQ9D2N9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps33aQ9D2N9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps33aQ9D2N9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps33aQ9D2N9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Gm21814-202ENSMUST00000203277 873 ntBASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Celf4-206ENSMUST00000224553 1729 ntBASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps33aQ9D2N9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms