Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb1Q9CQ70 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
H2afb1Q9CQ70 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm28033-201ENSMUST00000184224 96 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm6089-201ENSMUST00000197666 938 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Birc2-201ENSMUST00000054878 378 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb1Q9CQ70 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gm13418-201ENSMUST00000119097 944 ntBASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gm43347-201ENSMUST00000200226 580 ntBASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H2afb1Q9CQ70 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Gm37153-201ENSMUST00000193637 231 ntBASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Gm43767-201ENSMUST00000198933 381 ntBASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms